|
RNA Regulation
|
|
|
|
deepBase
|
|
|
fRNADB: FUNCTIONAL RNA DATABASE
|
|
GENE-SPECIFIC siRNA SELECTOR
|
|
INSERT DESIGN TOOL (AMBION)
|
|
NPInter
|
|
|
RegRNA:
REGULATORY RNA MOTIFS AND ELEMENTS FINDER
|
|
RibEx: RIBOSWITCH EXPLORER
|
|
RiDDLE
|
|
|
RNAdb
|
|
|
RNAi CONSORTIUM shRNA LIBRAY
|
|
RNAi DESIGN (INTEGRATED DNA TECHNOLOGIES)
|
|
RNAi EXPLORER™
|
|
RNAmutants
|
|
siDESIGN® CENTER (DHARMACON)
|
|
siDIRECT
|
|
|
siRNA AT WHITEHEAD
|
|
siRNA DESIGN
|
|
siRNA TARGET FINDER (AMBION)
|
|
TROD: T7 RNAi OLIGO DESIGNER)
|
|
|
Sequence Alignment
|
|
|
|
4SALE: RNA
SEQUENCE ALIGNMENT AND EDITING
|
|
3D-FOOTPRINT
|
|
3DNALandscapes
|
|
ACT: ARTEMIS COMPARISON TOOL
|
|
bl2BLAST: BLAST 2 SEQUENCES
|
|
BLink:BLAST LINK (NCBI)
|
|
CENSOR
|
|
|
CIRCOS
|
|
|
CORRELOGO
|
|
DIALIGN 2
|
|
|
ECR BROWSER
|
|
GALAXY
|
|
|
GALAXY SCREENCASTS
|
|
GeneCoder
|
|
HOMOLOGENE
|
|
InterPro
|
|
|
MEME/MAST
|
|
MODEL MAKER (NCBI)
|
|
NNDB: NEAREST NEIGHBOR DATABASE
|
|
OrthoSelect
|
|
PACDB:
SEARCH BY GENOME ALIGNMENT
|
|
PARALIGN
|
|
|
PIPMAKER: PERCENT IDENTITY PLOT
|
|
REPEATMASKER
|
|
RevTrans
|
|
|
RU: REPBASE UPDATE
|
|
SERpredict
|
|
SIB BLAST
SERVER: SIMPLE IS BEAUTIFUL
|
|
SPIDEY
|
|
|
SPLIGN (NCBI)
|
|
WAVIS: ALIGNMENT VISUALIZATION TOOLS
|
|
WebGMAP
|
|
Wise2
|
|
|
zPICTURE
|
|
|
|
|
Sequence
Retrieval
|
|
|
|
CENSOR
|
|
|
DDBJ: DNA
DATA BANK OF JAPAN
|
|
DNA PATENT DATABASE
|
|
EMBL DOCUMENTATION
|
|
ENTREZ GENE (NCBI)
|
|
ENTREZ GLOBAL QUERY
|
|
ENTREZ:
ACCESS TO NCBI DATABASES
|
|
FASTA/SSEARCH/GGSEARCH/GLSEARCH
|
|
FRAME-PROFILESCAN SERVER
|
|
GENBANK®
|
|
GENECARDS®
|
|
GENOMENET
|
|
INTERNATIONAL
NUCLEOTIDE SEQUENCE DATABASE COLLABORATION
|
|
NCBI SITE MAP
|
|
NCBI:
NATIONAL CENTER FOR BIOTECHNOLOGY INFORMATION
|
|
PATOME DB:
DATABASE OF ISSUED AND PUBLISHED BIOLOGICAL SEQUENCES
|
|
SEQUIN
|
|
|
SRS@EMBL-EBI
|
|
TELOMERASE DATABASE
|
|
|
Transcription factors and bindning sites
|
|
|
|
AGRIS:
ARABIDOPSIS GENE REGULATORY INFORMATION SERVER
|
|
AthaMap
|
|
|
CEAS:
CIS-REGULATORY ELEMENT ANNOTATION SYSTEM
|
|
CisMols
ANALYZER: Cis- REGULATORY MODULES
|
|
cisRED:
GENOME-WIDE REGULATORY MODULE AND ELEMENT PREDICTIONS
|
|
CLUSTER BUSTER
|
|
CONREAL:
CONSERVED REGULATORY ELEMENTS ANCHORED ALIGNMENT
|
|
CONSITE
|
|
|
DATF:
DATABASE OF Arabidopsis TRANSCRIPTION FACTORS
|
|
DBD:
TRANSCRIPTION FACTOR PREDICTION DATABASE
|
|
DiRE:
DISTANT REGULATORY ELEMENTS OF CO-REGULATED GENES
|
|
HOMEOBOX PAGE
|
|
HOMEODOMAIN RESOURCE
|
|
HOX-PRO
|
|
|
HTPSELEX DATABASE
|
|
INCLUSive
|
|
|
JASPAR
|
|
|
jPREdictor
|
|
|
MAPPER
|
|
|
MATBASE
|
|
|
MATINSPECTOR
|
|
MoD: MOTIF DISCOVERY
|
|
MOTIFVIZ
|
|
|
ORegAnno:
OPEN REGULATORY ANNOTATION DATABASE
|
|
PAZAR
|
|
|
PLACE:
PLANT CIS-ACTING REGULATORY DNA ELEMENTS
|
|
ProteDNA
|
|
|
RSAT:
REGULATORY SEQUENCE ANALYSIS TOOLS
|
|
rVISTA
|
|
|
SeqVISTA
|
|
|
TARGET EXPLORER
|
|
TESS:
TRANSCRIPTION ELEMENT SEARCH SYSTEM
|
|
TFBScluster
|
|
TFSEARCH
|
|
|
TOUCAN 2
|
|
|
TRACTOR DB
|
|
TRANSCompel®
|
|
TRANSFAC®
|
|
TRANSPATH®
|
|
TRANSTERM
|
|
TRAWLER
|
|
|
TRED:
TRANSCRIPTIONAL REGULATORY ELEMENT DATABASE
|
|
TrSDB
|
|
|
VOMBAT
|
|
|
YMF
|
|
|
ZINC FINGER TOOLS
|
|
|
Transcription Promoter
Sites
|
|
|
|
ANNOTATIONS
(OF TRANSCRIPTION FACTOR BINDING SITES WITHIN ORTHOLOGOUS PROMOTERS)
|
|
BKL Transfac®
|
|
ChromDB
|
|
|
CMA: COMPOSITE MODULE ANALYST
|
|
COREPROMOTER FINDER (CSHL)
|
|
CREB TARGET GENE DATABASE
|
|
CSHLmpd:
COLD SPRING HARBOR LABORATORY MAMMALIAN PROMOTER DATABASE
|
|
dbQSNP
|
|
|
DBTSS:
DATABASE OF TRANSCRIPTION START SITES
|
|
EPD: EUKARYOTIC PROMOTER DATABASE
|
|
GENE2PROMOTER
|
|
GenomeTraFac
|
|
LSPD: LIVER
SPECIFIC GENE PROMOTER DATABASE (CSHL)
|
|
NEURAL NETWORK PROMOTER PREDICTION
|
|
NPRD:
NUCLEOSOME POSITIONING REGION DATABASE
|
|
PlantPromDB
|
|
PLEIADES PROMOTER PROJECT
|
|
PromEC
|
|
|
PROMOSER
|
|
PROMOTER SCAN
|
|
PromoterSweep
|
|
PSCAN
|
|
|
S/MARt DB™
|
|
|
Vector Maps
|
|
|
|
CIRDNA
|
|
|
GENE INSPECTOR
|
|
IRESite
|
|
|
LINDNA
|
|
|
PlasMapper
|
|
PlasmID: PLASMID INFORMATION DATABASE
|
|
VECSCREEN (UNIVEC DATABASE)
|
|
VECTOR db
|
|
VECTOR MAPS (AGILENT)
|
|
VECTORDESIGNER™ (INVITROGEN)
|
|
VECTORS (PROMEGA)
|
|
VECTORS (RZPD)
|
|
|
Genomic Resources
|
|
|
Bioinformatics
|
|
|
|
Arena3D
|
|
|
ARGO GENOME BROWSER
|
|
AutoClass@IJM
|
|
BiNA: BIOLOGICAL NETWORK ANALYZER
|
|
BioCocoa
|
|
|
BIOCONDUCTOR
|
|
BioGRID:
BIOLOGICAL GENERAL REPOSITORY FOR INTERACTION DATASETS
|
|
BioLayout EXPRESS 3D
|
|
BIOLOGICAL
NETWORKS INTEGRATED RESEARCH ENVIRONMENT
|
|
BiOMART
|
|
|
BIOMOBY
|
|
|
BIOMODELS DATABASE (EMBL-EBI)
|
|
BIOMODELS.NET
|
|
BIOPATHWAYS CONSORTIUM
|
|
BioPAX: BIOLOGICAL PATHWAYS EXCHANGE
|
|
BIOPERL PROJECT
|
|
BIOPORTAL
|
|
BIOPYTHON PROJECT
|
|
BioTapestry
|
|
BioUML-
OPEN SOURCE JAVA FRAMEWORK FOR SYSTEMS BIOLOGY
|
|
BMC BIOINFORMATICS
|
|
CALEYDO
|
|
|
CELLCIRCUITS
|
|
CELLDESIGNER™
|
|
CellML MODEL REPOSITORY
|
|
CellML TOOLs
|
|
COLLEXIS®
|
|
|
CVTree:
COMPOSITION VECTOR PHYLOGENETIC ANALYSIS
|
|
CYTOSCAPE
|
|
DAS: DISTRIBUTED ANNOTATION SYSTEM
|
|
DAVID:
DATABASE FOR ANNOTATION, VISUALIZATION AND INTEGRATED DISCOVERY
|
|
E-CELL
|
|
|
EBI: EUROPEAN BIOINFORMATICS INSTITUTE
|
|
EDINBURGH PATHWAY EDITOR
|
|
ENCODE:
ENCYCLOPEDIA OF DNA ELEMENTS (NHGRI)
|
|
ENTREZ GENE (NCBI)
|
|
FGED:
FUNCTIONAL GENOMICS DATA SOCIETY
|
|
GENDOO:
GENE DISEASE FEATURES ONTOLOGY-BASED OVERVIEW
|
|
GeneAssist™ (APPLIED BIOSYSTEMS)
|
|
GENESPRING™
|
|
GENeVis
|
|
|
GenMAPP
|
|
|
GEO: GENE
EXPRESSION OMNIBUS (NCBI)
|
|
GO: GENE ONTOLOGY CONSORTIUM
|
|
ImageWeb
|
|
|
INGENUITY PATHWAYS ANALYSIS
|
|
INOH:
INTEGRATING NETWORK OBJECTS WITH HIERARCHIES
|
|
ISB:
INSTITUTE FOR SYSTEMS BIOLOGY
|
|
J. CRAIG VENTER INSTITUTE SOFTWARE TOOLS
|
|
JWS ONLINE
CELLULAR SYSTEMS MODELING
|
|
MGI GLOSSARY
|
|
MICROARRAY DATA ANALYSIS BIBLIOGRAPHY
|
|
MICROARRAY PROJECT (NHGRI)
|
|
MICROBIAL METAGENOMICS BIOINFORMATICS STRATEGY
|
|
MiGenAS: INTEGRATED GENE ANALYSIS SYSTEM
|
|
MIRIAM:
MINIMAL INFORMATION REQUESTED IN THE ANNOTATION OF BIOCHEMICAL MODELS
|
|
myGRID
|
|
|
NAViGaTOR:
NETWORK ANALYSIS VISUALIZATION AND GRAPHING TORONTO
|
|
Nbrowse
|
|
|
ODE: ONTOLOGICAL DISCOVERY ENVIRONMENT
|
|
OLS: ONTOLOGY LOOKUP SERVICE
|
|
OMNIGENE
|
|
ONDEX
|
|
|
OPENHELIX BIOINFORMATICS TRAINING
|
|
OSPREY
|
|
|
OWL: ONTOLOGY WEB LANGUAGE
|
|
PATTERN DISCOVERY GROUP (IBM)
|
|
PHOG: PHYLOFACTS ORTHOLOGY GROUP)
|
|
PosMed: POSITIONAL MEDLINE
|
|
PyNN: PYTHON NEURAL NETWORK MODELS
|
|
SAGEmap (NCBI)
|
|
SBGN:
SYSTEMS BIOLOGY GRAPHIC NOTATION
|
|
SBML SOFTWARE MATRIX
|
|
SBML:
SYSTEMS BIOLOGY MARKUP LANGUAGE
|
|
SENT:
SEMANTIC FEATURES IN TEXT
|
|
SEQUENCE
ANALYSIS WITH DISTRIBUTED RESOURCES (AN ONLINE COURSE)
|
|
SYSTEMS BIOLOGY WORKBENCH
|
|
TAVERNA
|
|
|
Tulip
|
|
|
VANTED:
VISUALIZATION AND ANALYSIS OF NETWORKS CONTAINING EXPERIMENTAL DATA
|
|
visANT
|
|
|
WEBCELL
|
|
|
WhichGenes
|
|
yED
|
|
|
|
Clone Collections
|
|
|
|
CLONERANGER™
|
|
CLONES (ATCC)
|
|
DNASU PLASMID REPOSITORY
|
|
GENESERVICE
|
|
I.M.A.G.E.
CONSORTIUM: iNTEGRATED MOLECULAR ANALYSIS OF GENOMES AND THEIR EXPRESSION
|
|
imaGenes
|
|
|
INVITROGEN CLONES
|
|
LINNEA™ GENES
|
|
MGC: MAMMALIAN GENE COLLECTION
|
|
OPEN BIOSYSTEMS
|
|
ORFEXPRESS™
|
|
ULTIMATE™ ORF BROWSER
|
|
|
Coparative Genomics
|
|
|
|
3D-GENOMICS
|
|
ARCHAEAL GENOME BROWSER (UCSC)
|
|
BBID:
BIOLOGICAL BIOCHEMICAL IMAGE DATABASE
|
|
CHAOS+DIALIGN
|
|
CIRCOS
|
|
|
CMR:
COMPREHENSIVE MICROBIAL RESOURCE (TIGR)
|
|
CORG: COMPARATIVE REGULATORY GENOMICS
|
|
CVTree: COMPOSITION VECTOR TREE
|
|
DATABASE OF ORTHOLOGOUS GROUPS
|
|
DEG:DATABASE
OF ESSENTIAL GENES
|
|
e-PROTEIN
|
|
|
ECR
BROWSER: EVOLUTIONARY CONSERVED REGIONS
|
|
eggNOG:
EVOLUTIONARY GENEALOGY OF GENES--NON-SUPERVISED ORTHOLOGOUS GROUPS
|
|
EGO: EUKARYOTIC GENE ORTHOLOGUES
|
|
EPGD:
EUKARYOTIC PARALOG GROUP DATABASE
|
|
ERGO™ (INTEGRATED GENOMICS)
|
|
eSHADOW:
EVOLUTIONARY PHYLOGENETIC SHADOWING OF CLOSELY RELATED SPECIES (LLNL)
|
|
FOOTPRINTER MANUAL
|
|
FUSIONDB
|
|
|
GATA:
GRAPHIC ALIGNMENT TOOL FOR COMPARATIVE SEQUENCE ANALYSIS
|
|
GENE INDEX PROJECT
|
|
GeneNest
|
|
|
GENETIC ANALYSIS SOFTWARE
|
|
GENOMES (EBI)
|
|
GENOMES FASTA
|
|
GESBAP:
GENE SET BASED ANALYSIS OF POLYMORPHISMS
|
|
GIB: GENOME INFORMATION BROKER (DDBJ)
|
|
HGT-DB: HORIZONTAL GENE TRANSFER DATABASE
|
|
HOMOLOGENE
|
|
ICCARE:
INTERSPECIFIC COMPARATIVE CLUSTERING AND ANNOTATION FOR EST
|
|
ICDS:
INTERRUPTED CODING SEQUENCE DATABASE
|
|
IMG: INTEGRATED MICROBIAL GENOMES
|
|
InParanoid: EUKARYOTIC ORTHOLOG GROUPS
|
|
INTEGR8 (EMBL-EBI)
|
|
INTEROLOG/ REGULOG DATABASE
|
|
KALIGN
|
|
|
MaM: MULTIPLE ALIGNMENT MANIPULATOR
|
|
MANET: MOLECULAR ANCESTRY NETWORK
|
|
MBGD: MICROBIAL GENOME DATABASE
|
|
MEDEA
(COMPARATIVE GENOMIC VISUALIZATION WITH ADOBE FLASH)
|
|
MEGA:
MOLECULAR EVOLUTIONARY GENETICS ANALYSIS
|
|
MG-RAST:
META GENOME RAPID ANNOTATION USING SUBSYSTEM TECHNOLOGY
|
|
MICROBIAL
GENOME DATABASE FOR COMPARATIVE ANALYSIS
|
|
MICROFOOTPRINTER
|
|
MizBee: A
MULTISCALE SYNTENY BROWSER
|
|
MrBayes
|
|
|
MULAN (LLNL)
|
|
NCBI TAXONOMY
|
|
ODB: OPERON DATABASE
|
|
OMICBROWSE (RIKEN)
|
|
OPTIC:
ORTHOLOGOUS AND PARALOGOUS TRANSCRIPTS IN CLADES
|
|
ORTHOMCL DB
|
|
PANDIT:
PROTEIN AND ASSOCIATED NUCLEOTIDE DOMAINS WITH INFERRED TREES
|
|
PANTHER:
PROTEIN ANALYSIS THROUGH EVOLUTIONARY RELATIONSHIPS
|
|
PAUP:
PHYLOGENETIC ANALYSIS USING PARSIMONY
|
|
PEDANT DATABASE
|
|
PHENOMICDB
|
|
PHOG: PHYLOFACTS ORTHOLOGY GROUP
|
|
PHYDBAC:
PHYLOGENOMIC DISPLAY OF BACTERIAL GENES
|
|
PHYLIP
|
|
|
PHYLOMEDB
|
|
PHYLOPARS
|
|
PHYML
|
|
|
POPSET (NCBI)
|
|
POWER: PHYLOGENETIC WEB REPEATER
|
|
PROLINKS
|
|
|
SPLITSTREE:
ANALYZING AND VISUALIZING EVOLUTIONARY DATA
|
|
SPRING:
SORTING PERMUTATION BY REVERSALS AND BLOCK INTERCHANGES
|
|
SUPERFAMILY
|
|
SVC:
STRUCTURED VISUALIZATION OF EVOLUTIONARY CONSERVED SEQUENCES
|
|
SYBIL (TIGR)
|
|
SynView
|
|
|
TAED: THE
ADAPTIVE EVOLUTION DATABASE
|
|
TAXONOMY BROWSER (NCBI)
|
|
THE SEED
|
|
|
TREE OF LIFE
|
|
TREEBASE
|
|
|
TREEFAM
|
|
|
VISTA SERVERS
|
|
xBASE
|
|
|
|
Drosophila Genome
|
|
|
|
BDGP GOLD cDNA COLLECTION
|
|
BLAST Drosophila SEQUENCES
|
|
Drosophila GENOME RESOURCES (NCBI)
|
|
Drosophila MICROARRAY CENTRE
|
|
Drosophila POLYMORPHISM DATABASE
|
|
Drosophila RNAi SCREENING CENTER
|
|
FLIGHT
|
|
|
FLYBASE: A
DATABASE OF Drosophila GENES AND GENOMES
|
|
FLYBRAIN
|
|
|
FLYMOVE
|
|
|
FlyTF: FLY TRANSCRIPTION FACTORS
|
|
FLYTRAP
|
|
|
FLYVIEW
|
|
|
GenomeRNAi
|
|
REDfly:
REGULATORY ELEMENT DATABASE FOR DROSOPHILA
|
|
THE INTERACTIVE FLY
|
|
|
Fish Genomes
|
|
|
|
FISHSCOPE
|
|
MEDAKAFISH HOMEPAGE
|
|
ZEBRAFISH GENOME RESOURCES (NCBI)
|
|
ZFIN:
ZEBRAFISH INFORMATION RESOURCE NETWORK
|
|
|
Fundamental Genomic
Resources
|
|
|
|
ABySS-EXPLORER
|
|
ANNO-J
|
|
|
BAR CODE OF
LIFE DATA SYSTEMS
|
|
BIOCONDUCTOR
|
|
BIOSAPIENS NETWORK
|
|
CBOL:
CONSORTIUM FOR THE BARCODE OF LIFE
|
|
CLC GENOMICS MACHINE
|
|
DATABASE OF GENOME SIZES
|
|
DNASTAR®
|
|
|
e-ENSEMBL (EBI)
|
|
EBI TOOLBOX
|
|
ECR
BROWSER: EVOLUTIONARY CONSERVED REGIONS
|
|
ENTREZ GENE
|
|
ENTREZ GENOME
|
|
GENETESTS
|
|
GENOME CHANNEL
|
|
GENOME GLOSSARY
|
|
GENOME REVIEWS (EBI)
|
|
GENOME WORKBENCH (NCBI)
|
|
GENOMES AT THE EBI
|
|
GenoViz
|
|
|
GOLD™ Genomes Online Database
|
|
HAWKEYE
|
|
|
IGV: INTEGRATIVE GENOMICS VIEWER
|
|
INSIGNIA
|
|
|
NCBI
DCODE.ORG COMPARATIVE GENOMICS
|
|
NCBI SITE MAP
|
|
SAMtools
|
|
|
|
Fungal Genomes
|
|
|
|
BCCM:
BELGIAN CO-ORDINATED COLLECTIONS OF MICRO-ORGANISMS
|
|
CADRE:
CENTRAL Aspergillus DATA REPOSITORY
|
|
CANDIDADB
|
|
CGD: Candida GENOME DATABASE
|
|
ChromatinDB
|
|
DRYGIN:DATA
REPOSITORY OF YEAST GENETIC INTERACTIONS
|
|
FUGOID:
FUNCTIONAL GENOMICS OF ORGANELLAR INTRONS DATABASE
|
|
FUNGAL GENETICS STOCK CENTER
|
|
FUNGAL GENOMES BLAST
|
|
GENOLEVURES
|
|
MYCORWEB
|
|
Neurospora HOME PAGE
|
|
OGD: OOMYCETE GENOMICS DATABASE (NCGR)
|
|
ORIDB: REPLICATION ORIGINS DATABASE
|
|
PHI-BASE:
PATHOGEN HOST INTERACTIONS
|
|
PHYTOPATHIC FUNGI DATABASE
|
|
PROPHECY:
PROFILING PHENOTYPIC CHARACTERISTICS IN YEAST
|
|
Saccharomyces
cerevisiae GENOME SNAPSHOT (SGD)
|
|
SCPD:
PROMOTER DATABASE OF Saccharomyces cerevisiae (CSHL)
|
|
SGD: Saccharomyces GENOME DATABASE
|
|
snoRNAs FROM Saccharomyces
|
|
YEAST GENE ORDER BROWSER
|
|
YEAST INTRON DATABASE
|
|
YEAST RESOURCE CENTER
|
|
YEASTRACT:
YEAST SEARCH FOR TRANSCRIPTIONAL REGULATORS AND CONSENSUS TRACKING
|
|
|
Gene Expression Databases
|
|
|
|
A-to-I RNA
EDITING WEBSITE
|
|
ARRAYEXPRESS (EBI)
|
|
BASE: BioArray SOFTWARE ENVIRONMENT
|
|
BioGPS (SYMATLAS)
|
|
cDNA2Genome
|
|
ChimerDB
|
|
|
ChromatinDB
|
|
cMAP: CONNECTIVITY MAP
|
|
CORG: COMPARATIVE REGULATORY GENOMICS
|
|
COXPRESDB:
CO-EXPRESSED GENE DATABASE
|
|
dbEST:
EXPRESSED SEQUENCE TAGS DATABASE (NCBI)
|
|
dbGAP:
DATABASE OF GENOTYPE AND PHENOTYPE (NCBI)
|
|
EUREXPRESS
|
|
EXPANDER:
EXpression Analyzer and DisplayER)
|
|
fRNAdb
|
|
|
G-QUADRUPLEX RESOURCE SITE
|
|
GEMMA
|
|
|
GENECODIS:
GENE ANNOTATIONS CO-OCURRENCE DISCOVERY
|
|
genepaint.org
|
|
GenMAPP
|
|
|
GEO: GENE EXPRESSION OMNIBUS
|
|
GREGLIST:
POTENTIAL G-QUADRUPLEX -REGULATED GENES LIST
|
|
GSEA: GENE SET ENRICHMENT ANALYSIS
|
|
GXD: GENE EXPRESSION DATABASE
|
|
HHMD: HUMAN HISTONE MODIFICATION DATABASE
|
|
HuGE: HUMAN GENE EXPRESSION INDEX
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HUGE: HUMAN UNIDENTIFIED GENE-ENCODED LARGE PROTEINS
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IMPRINTED GENE CATALOG
|
|
IRESite
|
|
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LIFEdb: DATABASE FOR LOCALIZATION, INTERACTION, FUNCTIONAL
ASSAYS AND EXPRESSION OF PROTEINS
|
|
MGI: MOUSE GENOME INFORMATICS (GENE EXPRESSION LITERATURE
QUERY)
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|
MODEL MAKER (NCBI)
|
|
MSigDB: MOLECULAR SIGNATURES DATABASE
|
|
NATsDB: NATURAL ANTISENSE TRANSCRIPTS DATABASE
|
|
NCBI DCODE.ORG COMPARATIVE GENOMICS DEVELOPMENTS
|
|
ODE: ONTOLOGICAL DISCOVERY ENVIRONMENT
|
|
PhenoGen INFORMATICS
|
|
PolyA DB
|
|
|
POMELLO II
|
|
PROBEBASE
|
|
PRODORIC: PROKARYOTIC DATABASE OF GENE REGULATION
|
|
PSCAN
|
|
|
QuadBase: QUADRUPLEX DATABASES
|
|
RAD: RNA ABUNDANCE DATABASE
|
|
READ: RIKEN EXPRESSION ARRAY DATABASE
|
|
RECODE: A DATABASE OF TRANSLATIONAL RECODING EVENTS
|
|
REDI DB: RNA EDITING DATABASE
|
|
RELNET: RELEVANCE NETWORKS
|
|
RNAdb: NONCODING RNAs
|
|
SIDD: STRESS INDUCED DNA DUPLEX DESTABILIZATION
|
|
SMD: STANFORD MICROARRY DATABASE
|
|
SPLIGN (NCBI)
|
|
SwissRegulon
|
|
ToppGene SUITE
|
|
UNIGENE
|
|
|
UTRdb
|
|
|
VisHiC: VISUALIZATION OF HIERARCHICAL CLUSTERING
|
|
WebGMAP
|
|
|
Gene Symbols and
Annotation
|
|
|
|
ARGH: BIOMEDICAL ACRONYM RESOLVER
|
|
BABELOMICS
|
|
BARCODE OF LIFE
|
|
BASys: BACTERIAL ANNOTATION SYSTEM
|
|
BioGPS
|
|
|
BOLD: BAR CODE OF LIFE DATA SYSTEMS
|
|
cDNA2Genome
|
|
COFECO: COMPOSITE FUNCTION ANNOTATION ENRICHED BY PROTEIN
COMPLEX DATA
|
|
DAVID: DATABASE FOR ANNOTATION, VISUALIZATION AND INTEGRATED
DISCOVERY
|
|
e!ENSEMBL
|
|
ECfunction: FUNCTIONAL ANNOTATION VIEWER
|
|
ENTREZ GENE (NCBI)
|
|
GenDB
|
|
|
GENECODIS: GENE ANNOTATIONS CO-OCURRENCE DISCOVERY
|
|
GO PaD: GENE ONTOLOGY PARTITION DATABASE
|
|
GO: GENE ONTOLOGY
|
|
GOA: GENE ONTOLOGY ANNOTATION (EMBL-EBI)
|
|
GOblet
|
|
|
GoGene
|
|
|
GOPET
|
|
|
GPSDB: GENE AND PROTEIN SYNONYM DATABASE
|
|
GUIDELINES FOR HUMAN GENE NOMENCLATURE
|
|
HARVARD GENE FUNCTIONAL ANNOTATION PREDICTION BROWSER
|
|
HGNC: HUGO GENE NOMENCLATURE COMMITTEE
|
|
HGNC: HUMAN GENE NOMENCLATURE SEARCH
|
|
IPNI: INTERNATIONAL PLANT NAMES INDEX
|
|
IUBMB NOMENCLATURE
|
|
IUPAC NOMENCLATURE
|
|
KLAM: KIM LAB ANNOTATION MAPPER
|
|
MICHECK:MICROBIAL GENOME CHECKER
|
|
MOLECULE PAGES (AfCS)
|
|
MOUSE NOMENCLATURE
|
|
PICR: PROTEIN IDENTIFIER CROSS-REFERENCE SERVICE
|
|
PLANT ONTOLOGY DATABASE
|
|
PROTEIN NAMING UTILITY
|
|
REFSEQ (NCBI)
|
|
TOPPGENE SUITE
|
|
TROPICOS
|
|
|
UMLSKS: UMLS KNOWLEDGE SOURCE SERVER
|
|
VLAD: VisuaL Annotation Display
|
|
WEGO: WEB GENE ONTOLOGY
|